References

 

 

Some Relevant MedLine References for the Deconvolution of Protein Secondary Structure Elements from Circular Dichroism Spectra by Artificial Backpropagation Neural Networks, from 01/1970 to 03/1998.

Böhm G, 1992

Quantitative analysis of protein far UV circular dichroism spectra by neural networks.
Protein Eng 5(3), 191-195 (1992)

Shubin VV, 1990

Determination of secondary structure of globular proteins using circular dichroism spectra
Mol Biol (Mosk) 24(1), 189-201 (1990)

Reed J, 1997

A set of constructed type spectra for the practical estimation of peptide secondary structure from circular dichroism.
Anal Biochem. 254(1), 36-40 (1997)

Sreerama N, 1999

Estimation of the number of alpha-helical and beta-strand segments in proteins using circular dichroism spectroscopy.
Protein Sci. 8(2), 370-380 (1999)

Pancoska P, 1999

Novel matrix descriptor for secondary structure segments in proteins: demonstration of predictability from circular dichroism spectra.
Anal Biochem. 267(1), 72-83 (1999)

Dalmas B, 1994

Prediction of protein secondary structure from circular dichroism spectra using artificial neural network techniques.
Biochem Mol Biol Int 34(1), 17-26 (1994)

Andrade MA, 1993

Evaluation of secondary structure of proteins from UV circular dichroism spectra using an unsupervised learning neural network.
Protein Eng 6(4), 383-390 (1993)

Compton LA, 1986

Analysis of protein circular dichroism spectra for secondary structure using a simple matrix multiplication.
Anal Biochem 155(1), 155-167 (1986)

Ramm EI, 1980

Calculation of the secondary structure of proteins from their circular dichroism spectra
Biofizika 25(2), 334-336 (1980) (no abstract available)

Hennessey JP Jr, 1981

Information content in the circular dichroism of proteins.
Biochemistry 20(5), 1085-1094 (1981)

Vieth M, 1991

Prediction of protein secondary structure by an enhanced neural network.
Acta Biochim Pol 38(3), 335-351 (1991)

Provencher SW, 1981

Estimation of globular protein secondary structure from circular dichroism.
Biochemistry 20(1), 33-37 (1981)

Perczel A, 1992

Deconvolution of the circular dichroism spectra of proteins: the circular dichroism spectra of the antiparallel beta-sheet in proteins.
Proteins 13(1), 57-69 (1992)

Ramm EI, 1980

Simultaneous calculation of the secondary structure and one of the reference spectra according to the protein circular dichroism
Biofizika 25(3), 561-562 (1980)

Bolotina IA, 1985

Determination of the secondary structure of proteins from circular dichroism spectra. IV. Contribution of aromatic amino acid residues into circular dichroism spectra of proteins in the peptide region
Mol Biol (Mosk) 19(5), 1409-1421 (1985)

van Stokkum IH, 1990

Estimation of protein secondary structure and error analysis from circular dichroism spectra.
Anal Biochem 191(1), 110-118 (1990)

Baker CC, 1976

On the analysis of circular dichroic spectra of proteins.
Biochemistry 15(3), 629-634 (1976)

Manavalan P, 1984

Prediction structure type for human leukocyte interferon subtype A from circular dichroism.
FEBS Lett 175(2), 227-230 (1984)

Sarver RW Jr, 1991

An infrared and circular dichroism combined approach to the analysis of protein secondary structure.
Anal Biochem 199(1), 61-67 (1991)

Sreerama N, 1994

Protein secondary structure from circular dichroism spectroscopy. Combining variable selection principle and cluster analysis with neural network, ridge regression and self-consistent methods.
J Mol Biol 242(4), 497-507 (1994)

Dalmas B, 1995

Prediction of protein secondary structure from circular dichroism spectra: an attempt to solve the problem of the best-fitting reference protein subsets.
Anal Biochem 225(1), 39-48 (1995)

Bolotina IA, 1981

Determination of protein secondary structure from circular dichroism spectra. III. Protein-derived base spectra of circular dichroism for antiparallel and parallel beta-structures
Mol Biol (Mosk) 15(1), 167-175 (1981)

Perczel A, 1992

Analysis of the circular dichroism spectrum of proteins using the convex constraint algorithm: a practical guide.
Anal Biochem 203(1), 83-93 (1992)

Pancoska P, 1992

Relationships between secondary structure fractions for globular proteins. Neural network analyses of crystallographic data sets.
Biochemistry 31(42), 10250-10257 (1992)

Menendez-Arias L, 1988

A BASIC microcomputer program to calculate the secondary structure of proteins from their circular dichroism spectrum.
Comput Appl Biosci 4(4), 479-482 (1988)

Pribic R, 1993

Protein secondary structure from Fourier transform infrared and/or circular dichroism spectra.
Anal Biochem 214(2), 366-378 (1993)

Johnson WC Jr, 1990

Protein secondary structure and circular dichroism: a practical guide.
Proteins 7(3), 205-214 (1990) (no abstract available)

Lancet 346(8991-8992), 1712 (1995) (no abstract available)

Morozov IuV, 1993

Standardization of a procedure for automatic determination of protein secondary structure from their circular dichroism spectra with respect to "aromatics"
Mol Biol (Mosk) 27(5), 1032-1038 (1993) (no abstract available)

Manavalan P, 1987

Variable selection method improves the prediction of protein secondary structure from circular dichroism spectra.
Anal Biochem 167(1), 76-85 (1987)

Sreerama N, 1994

Poly(pro)II helices in globular proteins: identification and circular dichroic analysis
Biochemistry 33(33), 10022-10025 (1994)

Holbrook SR, 1993

Application of computational neural networks to the prediction of protein structural features.
Genet Eng (N Y) 15, 1-19 (1993) (no abstract available)

Holley LH, 1989

Protein secondary structure prediction with a neural network.
Proc Natl Acad Sci U S A 86(1), 152-156 (1989)

Pribic R, 1994

Principal component analysis of Fourier transform infrared and/or circular dichroism spectra of proteins applied in a calibration of protein secondary structure.
Anal Biochem 223(1), 26-34 (1994)

Barlow TW, 1995

Feed-forward neural networks for secondary structure prediction.
J Mol Graph 13(3), 175-183 (1995)

Pancoska P, 1994

Quantitative analysis of vibrational circular dichroism spectra of proteins. Problems and perspectives.
Faraday Discuss 99, 287-310 (1994)

Illarionova NG, 1984

Analysis of the secondary structure of urokinase by the circular dichroism method
Mol Biol (Mosk) 18(2), 358-361 (1984)

Johnson WC Jr, 1986

Extending circular dichroism spectra into the vacuum UV and its application to proteins.
Photochem Photobiol 44(3), 307-313 (1986) (no abstract available)

Sarver RW Jr, 1991

Protein secondary structure from Fourier transform infrared spectroscopy: a data base analysis.
Anal Biochem 194(1), 89-100 (1991)

Deleage G, 1993

An interactive graphic program for calculating the secondary structure content of proteins from circular dichroism spectrum.
Comput Appl Biosci 9(2), 197-199 (1993)

Manning MC, 1989

Underlying assumptions in the estimation of secondary structure content in proteins by circular dichroism spectroscopy--a critical review.
J Pharm Biomed Anal 7(10), 1103-1119 (1989)

Venyaminov SYu, 1994

Determination of protein tertiary structure class from circular dichroism spectra.
Anal Biochem 222(1), 176-184 (1994)

Holley LH, 1991

Neural networks for protein structure prediction.
Methods Enzymol 202, 204-224 (1991) (no abstract available)

Carrara EA, 1992

Improvement of protein secondary structure prediction by combination of statistical algorithms and circular dichroism.
Arch Biochem Biophys 294(1), 107-114 (1992)

Bobba A, 1990

Estimation of protein secondary structure from circular dichroism spectra: a critical examination of the CONTIN program.
Protein Seq Data Anal 3(1), 7-10 (1990)

Toumadje A, 1992

Extending CD spectra of proteins to 168 nm improves the analysis for secondary structures.
Anal Biochem 200(2), 321-331 (1992)

Johnson WC Jr, 1988

Secondary structure of proteins through circular dichroism spectroscopy.
Annu Rev Biophys Biophys Chem 17, 145-166 (1988) (no abstract available)

Woody RW, 1996

Circular dichroism of proteins: recent developments in analysis and prediction
Tanpakushitsu Kakusan Koso 41(1), 56-69 (1996) (no abstract available)

Sieber V, 1995

Circular dichroism of the parallel beta helical proteins pectate lyase C and E.
Proteins 23(1), 32-37 (1995)

Sreerama N, 1993

A self-consistent method for the analysis of protein secondary structure from circular dichroism.
Anal Biochem 209(1), 32-44 (1993)

Schnarr M, 1982

Secondary structure of the lac repressor headpiece. Possibilities and limitations of a joint infrared and circular dichroism study.
Eur J Biochem 128(2-3), 515-520 (1982)

Venyaminov SYu, 1991

Some problems of CD analyses of protein conformation.
Anal Biochem 198(2), 250-255 (1991)

Willick G, 1977

Equivalency of linear least squares curve fitting and reciprocal functions in protein circular dichroic spectra analysis.
Biophys Chem 7(3), 223-227 (1977)

Hammonds RG Jr, 1977

Least-squares analysis of circular dichroic spectra of proteins.
Eur J Biochem 74(2), 421-424 (1977)

Sutherland JC, 1992

Circular dichroism user facility at the National Synchrotron Light Source: estimation of protein secondary structure.
Biotechniques 13(4), 588-590 (1992)

Bloemendal M, 1995

Structural information on proteins from circular dichroism spectroscopy possibilities and limitations.
Pharm Biotechnol 7, 65-100 (1995) (no abstract available)

Perczel A, 1991

Convex constraint analysis: a natural deconvolution of circular dichroism curves of proteins.
Protein Eng 4(6), 669-679 (1991)

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