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Some Relevant MedLine References
for the Deconvolution of Protein Secondary Structure Elements from
Circular Dichroism Spectra by Artificial Backpropagation Neural
Networks, from 01/1970 to 03/1998.
Böhm
G, 1992
Quantitative analysis of protein far UV
circular dichroism spectra by neural networks.
Protein Eng 5(3), 191-195 (1992)
- Shubin
VV, 1990
-
Determination of secondary structure of globular proteins using
circular dichroism spectra
Mol Biol (Mosk) 24(1), 189-201 (1990)
- Reed
J, 1997
-
A set of constructed type spectra for the practical estimation
of peptide secondary structure from circular dichroism.
Anal Biochem. 254(1), 36-40 (1997)
- Sreerama
N, 1999
-
Estimation of the number of alpha-helical and beta-strand
segments in proteins using circular dichroism spectroscopy.
Protein Sci. 8(2), 370-380 (1999)
- Pancoska
P, 1999
-
Novel matrix descriptor for secondary structure segments in
proteins: demonstration of predictability from circular dichroism
spectra.
Anal Biochem. 267(1), 72-83 (1999)
- Dalmas
B, 1994
-
Prediction of protein secondary structure from circular dichroism
spectra using artificial neural network techniques.
Biochem Mol Biol Int 34(1), 17-26 (1994)
- Andrade
MA, 1993
-
Evaluation of secondary structure of proteins from UV circular
dichroism spectra using an unsupervised learning neural network.
Protein Eng 6(4), 383-390 (1993)
- Compton
LA, 1986
-
Analysis of protein circular dichroism spectra for secondary
structure using a simple matrix multiplication.
Anal Biochem 155(1), 155-167 (1986)
- Ramm
EI, 1980
-
Calculation of the secondary structure of proteins from their
circular dichroism spectra
Biofizika 25(2), 334-336 (1980) (no abstract available)
- Hennessey
JP Jr, 1981
-
Information content in the circular dichroism of proteins.
Biochemistry 20(5), 1085-1094 (1981)
- Vieth
M, 1991
-
Prediction of protein secondary structure by an enhanced neural
network.
Acta Biochim Pol 38(3), 335-351 (1991)
- Provencher
SW, 1981
-
Estimation of globular protein secondary structure from circular
dichroism.
Biochemistry 20(1), 33-37 (1981)
- Perczel
A, 1992
-
Deconvolution of the circular dichroism spectra of proteins:
the circular dichroism spectra of the antiparallel beta-sheet
in proteins.
Proteins 13(1), 57-69 (1992)
- Ramm
EI, 1980
-
Simultaneous calculation of the secondary structure and one
of the reference spectra according to the protein circular dichroism
Biofizika 25(3), 561-562 (1980)
- Bolotina
IA, 1985
-
Determination of the secondary structure of proteins from
circular dichroism spectra. IV. Contribution of aromatic amino
acid residues into circular dichroism spectra of proteins in
the peptide region
Mol Biol (Mosk) 19(5), 1409-1421 (1985)
- van
Stokkum IH, 1990
-
Estimation of protein secondary structure and error analysis
from circular dichroism spectra.
Anal Biochem 191(1), 110-118 (1990)
- Baker
CC, 1976
-
On the analysis of circular dichroic spectra of proteins.
Biochemistry 15(3), 629-634 (1976)
- Manavalan
P, 1984
-
Prediction structure type for human leukocyte interferon subtype
A from circular dichroism.
FEBS Lett 175(2), 227-230 (1984)
- Sarver
RW Jr, 1991
-
An infrared and circular dichroism combined approach to the
analysis of protein secondary structure.
Anal Biochem 199(1), 61-67 (1991)
- Sreerama
N, 1994
-
Protein secondary structure from circular dichroism spectroscopy.
Combining variable selection principle and cluster analysis
with neural network, ridge regression and self-consistent methods.
J Mol Biol 242(4), 497-507 (1994)
- Dalmas
B, 1995
-
Prediction of protein secondary structure from circular dichroism
spectra: an attempt to solve the problem of the best-fitting
reference protein subsets.
Anal Biochem 225(1), 39-48 (1995)
- Bolotina
IA, 1981
-
Determination of protein secondary structure from circular
dichroism spectra. III. Protein-derived base spectra of circular
dichroism for antiparallel and parallel beta-structures
Mol Biol (Mosk) 15(1), 167-175 (1981)
- Perczel
A, 1992
-
Analysis of the circular dichroism spectrum of proteins using
the convex constraint algorithm: a practical guide.
Anal Biochem 203(1), 83-93 (1992)
- Pancoska
P, 1992
-
Relationships between secondary structure fractions for globular
proteins. Neural network analyses of crystallographic data sets.
Biochemistry 31(42), 10250-10257 (1992)
- Menendez-Arias
L, 1988
-
A BASIC microcomputer program to calculate the secondary structure
of proteins from their circular dichroism spectrum.
Comput Appl Biosci 4(4), 479-482 (1988)
- Pribic
R, 1993
-
Protein secondary structure from Fourier transform infrared
and/or circular dichroism spectra.
Anal Biochem 214(2), 366-378 (1993)
- Johnson
WC Jr, 1990
-
Protein secondary structure and circular dichroism: a practical
guide.
Proteins 7(3), 205-214 (1990) (no abstract available)
-
Lancet 346(8991-8992), 1712 (1995) (no abstract available)
- Morozov
IuV, 1993
-
Standardization of a procedure for automatic determination
of protein secondary structure from their circular dichroism
spectra with respect to "aromatics"
Mol Biol (Mosk) 27(5), 1032-1038 (1993) (no abstract available)
- Manavalan
P, 1987
-
Variable selection method improves the prediction of protein
secondary structure from circular dichroism spectra.
Anal Biochem 167(1), 76-85 (1987)
- Sreerama
N, 1994
-
Poly(pro)II helices in globular proteins: identification and
circular dichroic analysis
Biochemistry 33(33), 10022-10025 (1994)
- Holbrook
SR, 1993
-
Application of computational neural networks to the prediction
of protein structural features.
Genet Eng (N Y) 15, 1-19 (1993) (no abstract available)
- Holley
LH, 1989
-
Protein secondary structure prediction with a neural network.
Proc Natl Acad Sci U S A 86(1), 152-156 (1989)
- Pribic
R, 1994
-
Principal component analysis of Fourier transform infrared
and/or circular dichroism spectra of proteins applied in a calibration
of protein secondary structure.
Anal Biochem 223(1), 26-34 (1994)
- Barlow
TW, 1995
-
Feed-forward neural networks for secondary structure prediction.
J Mol Graph 13(3), 175-183 (1995)
- Pancoska
P, 1994
-
Quantitative analysis of vibrational circular dichroism spectra
of proteins. Problems and perspectives.
Faraday Discuss 99, 287-310 (1994)
- Illarionova
NG, 1984
-
Analysis of the secondary structure of urokinase by the circular
dichroism method
Mol Biol (Mosk) 18(2), 358-361 (1984)
- Johnson
WC Jr, 1986
-
Extending circular dichroism spectra into the vacuum UV and
its application to proteins.
Photochem Photobiol 44(3), 307-313 (1986) (no abstract available)
- Sarver
RW Jr, 1991
-
Protein secondary structure from Fourier transform infrared
spectroscopy: a data base analysis.
Anal Biochem 194(1), 89-100 (1991)
- Deleage
G, 1993
-
An interactive graphic program for calculating the secondary
structure content of proteins from circular dichroism spectrum.
Comput Appl Biosci 9(2), 197-199 (1993)
- Manning
MC, 1989
-
Underlying assumptions in the estimation of secondary structure
content in proteins by circular dichroism spectroscopy--a critical
review.
J Pharm Biomed Anal 7(10), 1103-1119 (1989)
- Venyaminov
SYu, 1994
-
Determination of protein tertiary structure class from circular
dichroism spectra.
Anal Biochem 222(1), 176-184 (1994)
- Holley
LH, 1991
-
Neural networks for protein structure prediction.
Methods Enzymol 202, 204-224 (1991) (no abstract available)
- Carrara
EA, 1992
-
Improvement of protein secondary structure prediction by combination
of statistical algorithms and circular dichroism.
Arch Biochem Biophys 294(1), 107-114 (1992)
- Bobba
A, 1990
-
Estimation of protein secondary structure from circular dichroism
spectra: a critical examination of the CONTIN program.
Protein Seq Data Anal 3(1), 7-10 (1990)
- Toumadje
A, 1992
-
Extending CD spectra of proteins to 168 nm improves the analysis
for secondary structures.
Anal Biochem 200(2), 321-331 (1992)
- Johnson
WC Jr, 1988
-
Secondary structure of proteins through circular dichroism
spectroscopy.
Annu Rev Biophys Biophys Chem 17, 145-166 (1988) (no abstract
available)
- Woody
RW, 1996
-
Circular dichroism of proteins: recent developments in analysis
and prediction
Tanpakushitsu Kakusan Koso 41(1), 56-69 (1996) (no abstract
available)
- Sieber
V, 1995
-
Circular dichroism of the parallel beta helical proteins pectate
lyase C and E.
Proteins 23(1), 32-37 (1995)
- Sreerama
N, 1993
-
A self-consistent method for the analysis of protein secondary
structure from circular dichroism.
Anal Biochem 209(1), 32-44 (1993)
- Schnarr
M, 1982
-
Secondary structure of the lac repressor headpiece. Possibilities
and limitations of a joint infrared and circular dichroism study.
Eur J Biochem 128(2-3), 515-520 (1982)
- Venyaminov
SYu, 1991
-
Some problems of CD analyses of protein conformation.
Anal Biochem 198(2), 250-255 (1991)
- Willick
G, 1977
-
Equivalency of linear least squares curve fitting and reciprocal
functions in protein circular dichroic spectra analysis.
Biophys Chem 7(3), 223-227 (1977)
- Hammonds
RG Jr, 1977
-
Least-squares analysis of circular dichroic spectra of proteins.
Eur J Biochem 74(2), 421-424 (1977)
- Sutherland
JC, 1992
-
Circular dichroism user facility at the National Synchrotron
Light Source: estimation of protein secondary structure.
Biotechniques 13(4), 588-590 (1992)
- Bloemendal
M, 1995
-
Structural information on proteins from circular dichroism
spectroscopy possibilities and limitations.
Pharm Biotechnol 7, 65-100 (1995) (no abstract available)
- Perczel
A, 1991
-
Convex constraint analysis: a natural deconvolution of circular
dichroism curves of proteins.
Protein Eng 4(6), 669-679 (1991)
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